WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.15 Sequence Name  Y111B2A.15
Length (nt)  1143   Chromosome Location  III: 12652562-12652704
Chromosome . Primary Identifier  III Chromosome Location . Start  12652562
Chromosome Location . End  12652704
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.15

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26632 TPST-1 43.3 380 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00061422
WBRNAi00061423
WBRNAi00055345
WBRNAi00026589
WBRNAi00073645
WBRNAi00073644
WBRNAi00073647
WBRNAi00073646
WBRNAi00073648
WBRNAi00027791
WBRNAi00061421
WBRNAi00082866
WBRNAi00112240
WBRNAi00112241
WBRNAi00072713
WBRNAi00073642
WBRNAi00073641
WBRNAi00073643
WBRNAi00001967
WBRNAi00082880

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.15 12652562 12652704 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013737 tpst-1 Y111B2A.15 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.15 12652562 12652704 -1
CDS:Y111B2A.15 12654668 12655235 -1
CDS:Y111B2A.15 12656397 12656605 -1
CDS:Y111B2A.15 12660570 12660718 -1
CDS:Y111B2A.15 12662131 12662204 -1

1 Sequence

Length
1143

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.15.1 Y111B2A.15.1 1441   III: 12652346-12662286