WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.16.1 Sequence Name  Y111B2A.16.1
Length (nt)  1568   Chromosome Location  III: 12670689-12673423
Chromosome . Primary Identifier  III Chromosome Location . Start  12670689
Chromosome Location . End  12673423 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006389 taf-7.2 Y111B2A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.16 Y111B2A.16 711   III: 12671538-12672200

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.16.1 12670689 12673423 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107786   1512   III: 12670689-12672200 Caenorhabditis elegans
Exon107788   56   III: 12673368-12673423 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.16.1 12670689 12673423 -1

1 Sequence

Length
1568

1 Sequence Ontology Term

Identifier Name Description
transcript