WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.17.1 Sequence Name  Y111B2A.17.1
Length (nt)  2403   Chromosome Location  III: 12673677-12686225
Chromosome . Primary Identifier  III Chromosome Location . Start  12673677
Chromosome Location . End  12686225 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013738 elpc-2 Y111B2A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.17 Y111B2A.17 2337   III: 12673684-12673812

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.17.1 12673677 12686225 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107789   136   III: 12673677-12673812 Caenorhabditis elegans
Exon107790   258   III: 12673861-12674118 Caenorhabditis elegans
Exon107791   262   III: 12674828-12675089 Caenorhabditis elegans
Exon107793   415   III: 12677262-12677676 Caenorhabditis elegans
Exon107794   226   III: 12678690-12678915 Caenorhabditis elegans
Exon107795   322   III: 12680770-12681091 Caenorhabditis elegans
Exon107796   131   III: 12683227-12683357 Caenorhabditis elegans
Exon107797   181   III: 12683716-12683896 Caenorhabditis elegans
Exon107798   472   III: 12685754-12686225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.17.1 12673677 12686225 1

1 Sequence

Length
2403

1 Sequence Ontology Term

Identifier Name Description
transcript