WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.19a Sequence Name  Y111B2A.19a
Length (nt)  1539   Chromosome Location  III: 12688327-12688366
Chromosome . Primary Identifier  III Chromosome Location . Start  12688327
Chromosome Location . End  12688366
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.19a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52802 SPIN-4, isoform a 56.3 512 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055352
WBRNAi00036573

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.19a 12688327 12688366 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013739 spin-4 Y111B2A.19 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.19a 12688327 12688366 1
CDS:Y111B2A.19a 12688422 12688576 1
CDS:Y111B2A.19a 12688629 12688769 1
CDS:Y111B2A.19a 12689834 12690192 1
CDS:Y111B2A.19a 12692398 12692541 1
CDS:Y111B2A.19a 12693783 12694336 1
CDS:Y111B2A.19a 12695522 12695667 1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.19a.1 Y111B2A.19a.1 2478   III: 12688318-12698249