WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.18 Sequence Name  Y111B2A.18
Length (nt)  777   Chromosome Location  III: 12687017-12687235
Chromosome . Primary Identifier  III Chromosome Location . Start  12687017
Chromosome Location . End  12687235
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.18

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31089 RSP-3 28.7 258 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00075669
WBRNAi00075668
WBRNAi00009285
WBRNAi00055349
WBRNAi00055350
WBRNAi00055351
WBRNAi00075320
WBRNAi00007098
WBRNAi00071379
WBRNAi00075321
WBRNAi00036572
WBRNAi00083642
WBRNAi00083744
WBRNAi00083837
WBRNAi00026590
WBRNAi00080100
WBRNAi00080182
WBRNAi00066406
WBRNAi00066324
WBRNAi00066323
WBRNAi00066405
WBRNAi00069870

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.18 12687017 12687235 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004700 rsp-3 Y111B2A.18 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.18 12687017 12687235 -1
CDS:Y111B2A.18 12687302 12687689 -1
CDS:Y111B2A.18 12687737 12687906 -1

1 Sequence

Length
777

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.18.2 Y111B2A.18.2 1336   III: 12686182-12687922
Transcript:Y111B2A.18.1 Y111B2A.18.1 1103   III: 12686701-12687916