WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y111B2A.24.1 Sequence Name  Y111B2A.24.1
Length (nt)  2294   Chromosome Location  III: 12699494-12711136
Chromosome . Primary Identifier  III Chromosome Location . Start  12699494
Chromosome Location . End  12711136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.24.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013742 sas-1 Y111B2A.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y111B2A.24 Y111B2A.24 1713   III: 12699499-12699571

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.24.1 12699494 12711136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107822   78   III: 12699494-12699571 Caenorhabditis elegans
Exon107823   133   III: 12701208-12701340 Caenorhabditis elegans
Exon107824   115   III: 12702251-12702365 Caenorhabditis elegans
Exon107825   105   III: 12704823-12704927 Caenorhabditis elegans
Exon107826   353   III: 12706536-12706888 Caenorhabditis elegans
Exon107827   387   III: 12707762-12708148 Caenorhabditis elegans
Exon107828   1123   III: 12710014-12711136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y111B2A.24.1 12699494 12711136 1

1 Sequence

Length
2294

1 Sequence Ontology Term

Identifier Name Description
transcript