WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y111B2A.20a Sequence Name  Y111B2A.20a
Length (nt)  1023   Chromosome Location  III: 12711560-12711693
Chromosome . Primary Identifier  III Chromosome Location . Start  12711560
Chromosome Location . End  12711693
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y111B2A.20a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24129 HUT-1, isoform a 38.3 340 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00055354
WBRNAi00093107
WBRNAi00093109
WBRNAi00093108
WBRNAi00093111
WBRNAi00065165
WBRNAi00036568
WBRNAi00093110
WBRNAi00065157
WBRNAi00063000
WBRNAi00065154
WBRNAi00065163
WBRNAi00065160

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.20a 12711560 12711693 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013740 hut-1 Y111B2A.20 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y111B2A.20a 12711560 12711693 1
CDS:Y111B2A.20a 12711742 12711885 1
CDS:Y111B2A.20a 12711958 12712228 1
CDS:Y111B2A.20a 12712282 12712408 1
CDS:Y111B2A.20a 12713321 12713667 1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y111B2A.20a.1 Y111B2A.20a.1 1230   III: 12711560-12713874