WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC482.1.1 Sequence Name  ZC482.1.1
Length (nt)  1775   Chromosome Location  III: 12771868-12779726
Chromosome . Primary Identifier  III Chromosome Location . Start  12771868
Chromosome Location . End  12779726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC482.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001512 gab-1 ZC482.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC482.1 ZC482.1 1653   III: 12771989-12772028

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC482.1.1 12771868 12779726 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107954   161   III: 12771868-12772028 Caenorhabditis elegans
Exon107955   168   III: 12773084-12773251 Caenorhabditis elegans
Exon107956   194   III: 12773297-12773490 Caenorhabditis elegans
Exon107957   84   III: 12773544-12773627 Caenorhabditis elegans
Exon107958   82   III: 12773682-12773763 Caenorhabditis elegans
Exon107959   101   III: 12773805-12773905 Caenorhabditis elegans
Exon107960   383   III: 12774971-12775353 Caenorhabditis elegans
Exon107961   203   III: 12775750-12775952 Caenorhabditis elegans
Exon107962   107   III: 12776956-12777062 Caenorhabditis elegans
Exon107963   68   III: 12777128-12777195 Caenorhabditis elegans
Exon107964   137   III: 12779214-12779350 Caenorhabditis elegans
Exon107965   87   III: 12779640-12779726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC482.1.1 12771868 12779726 -1

1 Sequence

Length
1775

1 Sequence Ontology Term

Identifier Name Description
transcript