WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC482.5.1 Sequence Name  ZC482.5.1
Length (nt)  1521   Chromosome Location  III: 12785154-12793176
Chromosome . Primary Identifier  III Chromosome Location . Start  12785154
Chromosome Location . End  12793176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC482.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013914 lgc-37 ZC482.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC482.5 ZC482.5 1452   III: 12785161-12785243

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC482.5.1 12785154 12793176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107947   90   III: 12785154-12785243 Caenorhabditis elegans
Exon107948   110   III: 12785286-12785395 Caenorhabditis elegans
Exon107949   71   III: 12785441-12785511 Caenorhabditis elegans
Exon107950   230   III: 12786997-12787226 Caenorhabditis elegans
Exon107956   227   III: 12789712-12789938 Caenorhabditis elegans
Exon107957   247   III: 12791792-12792038 Caenorhabditis elegans
Exon107958   118   III: 12792366-12792483 Caenorhabditis elegans
Exon107959   154   III: 12792532-12792685 Caenorhabditis elegans
Exon107960   68   III: 12792734-12792801 Caenorhabditis elegans
Exon107961   206   III: 12792971-12793176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC482.5.1 12785154 12793176 1

1 Sequence

Length
1521

1 Sequence Ontology Term

Identifier Name Description
transcript