WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:BE10.1.1 Sequence Name  BE10.1.1
Length (nt)  1081   Chromosome Location  III: 12787643-12789520
Chromosome . Primary Identifier  III Chromosome Location . Start  12787643
Chromosome Location . End  12789520 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
BE10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007209 BE10.1 BE10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:BE10.1 BE10.1 975   III: 12787679-12787856

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:BE10.1.1 12787643 12789520 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107951   214   III: 12787643-12787856 Caenorhabditis elegans
Exon107952   143   III: 12787900-12788042 Caenorhabditis elegans
Exon107953   224   III: 12788096-12788319 Caenorhabditis elegans
Exon107954   413   III: 12788480-12788892 Caenorhabditis elegans
Exon107955   87   III: 12789434-12789520 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:BE10.1.1 12787643 12789520 -1

1 Sequence

Length
1081

1 Sequence Ontology Term

Identifier Name Description
transcript