WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:BE10.2 Sequence Name  BE10.2
Length (nt)  1518   Chromosome Location  III: 12793498-12793599
Chromosome . Primary Identifier  III Chromosome Location . Start  12793498
Chromosome Location . End  12793599
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
BE10.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30592 AGMO-1 58.5 505 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00070247
WBRNAi00001751
WBRNAi00039223
WBRNAi00009873
WBRNAi00006405
WBRNAi00028250
WBRNAi00070244
WBRNAi00070246
WBRNAi00070245
WBRNAi00088854
WBRNAi00088894
WBRNAi00110968

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:BE10.2 12793498 12793599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007210 agmo-1 BE10.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:BE10.2 12793498 12793599 -1
CDS:BE10.2 12793854 12794013 -1
CDS:BE10.2 12795149 12795630 -1
CDS:BE10.2 12796349 12796474 -1
CDS:BE10.2 12796532 12796731 -1
CDS:BE10.2 12797371 12797522 -1
CDS:BE10.2 12797730 12797957 -1
CDS:BE10.2 12798052 12798119 -1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:BE10.2.1 BE10.2.1 1668   III: 12793386-12798157
Transcript:BE10.2.2 BE10.2.2 1786   III: 12793390-12798569