WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.2.1 Sequence Name  Y37D8A.2.1
Length (nt)  1820   Chromosome Location  III: 12820193-12825651
Chromosome . Primary Identifier  III Chromosome Location . Start  12820193
Chromosome Location . End  12825651 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012544 Y37D8A.2 Y37D8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.2 Y37D8A.2 1716   III: 12820258-12820326

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.2.1 12820193 12825651 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108003   134   III: 12820193-12820326 Caenorhabditis elegans
Exon108004   125   III: 12821086-12821210 Caenorhabditis elegans
Exon108005   80   III: 12821261-12821340 Caenorhabditis elegans
Exon108007   268   III: 12821775-12822042 Caenorhabditis elegans
Exon108008   109   III: 12822432-12822540 Caenorhabditis elegans
Exon108009   136   III: 12822586-12822721 Caenorhabditis elegans
Exon108010   304   III: 12823318-12823621 Caenorhabditis elegans
Exon108011   534   III: 12824652-12825185 Caenorhabditis elegans
Exon108012   130   III: 12825522-12825651 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.2.1 12820193 12825651 1

1 Sequence

Length
1820

1 Sequence Ontology Term

Identifier Name Description
transcript