WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.3.1 Sequence Name  Y37D8A.3.1
Length (nt)  1067   Chromosome Location  III: 12829368-12837274
Chromosome . Primary Identifier  III Chromosome Location . Start  12829368
Chromosome Location . End  12837274 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012545 Y37D8A.3 Y37D8A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.3 Y37D8A.3 921   III: 12829370-12829532

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.3.1 12829368 12837274 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108013   165   III: 12829368-12829532 Caenorhabditis elegans
Exon108014   126   III: 12830127-12830252 Caenorhabditis elegans
Exon108015   210   III: 12830616-12830825 Caenorhabditis elegans
Exon108016   120   III: 12831619-12831738 Caenorhabditis elegans
Exon108017   105   III: 12832757-12832861 Caenorhabditis elegans
Exon108018   103   III: 12834307-12834409 Caenorhabditis elegans
Exon108019   238   III: 12837037-12837274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.3.1 12829368 12837274 1

1 Sequence

Length
1067

1 Sequence Ontology Term

Identifier Name Description
transcript