WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.13.1 Sequence Name  Y37D8A.13.1
Length (nt)  3410   Chromosome Location  III: 12881043-12891738
Chromosome . Primary Identifier  III Chromosome Location . Start  12881043
Chromosome Location . End  12891738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006804 unc-71 Y37D8A.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.13 Y37D8A.13 3129   III: 12881193-12881745

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.13.1 12881043 12891738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108083   703   III: 12881043-12881745 Caenorhabditis elegans
Exon108084   1277   III: 12883188-12884464 Caenorhabditis elegans
Exon108085   510   III: 12885170-12885679 Caenorhabditis elegans
Exon108086   72   III: 12886889-12886960 Caenorhabditis elegans
Exon108087   644   III: 12889331-12889974 Caenorhabditis elegans
Exon108088   204   III: 12891535-12891738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.13.1 12881043 12891738 -1

1 Sequence

Length
3410

1 Sequence Ontology Term

Identifier Name Description
transcript