WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.12a.1 Sequence Name  Y37D8A.12a.1
Length (nt)  2079   Chromosome Location  III: 12878196-12880701
Chromosome . Primary Identifier  III Chromosome Location . Start  12878196
Chromosome Location . End  12880701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012552 enu-3.5 Y37D8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.12a Y37D8A.12a 1377   III: 12878658-12878717

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.12a.1 12878196 12880701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108121   522   III: 12878196-12878717 Caenorhabditis elegans
Exon108123   336   III: 12878776-12879111 Caenorhabditis elegans
Exon108125   138   III: 12879226-12879363 Caenorhabditis elegans
Exon108126   561   III: 12879524-12880084 Caenorhabditis elegans
Exon108128   147   III: 12880133-12880279 Caenorhabditis elegans
Exon108131   375   III: 12880327-12880701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.12a.1 12878196 12880701 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
transcript