WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.17c.1 Sequence Name  Y37D8A.17c.1
Length (nt)  678   Chromosome Location  III: 12921529-12925796
Chromosome . Primary Identifier  III Chromosome Location . Start  12921529
Chromosome Location . End  12925796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.17c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012555 npp-25 Y37D8A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.17c Y37D8A.17c 678   III: 12921529-12921888

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.17c.1 12921529 12925796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108105   360   III: 12921529-12921888 Caenorhabditis elegans
Exon108108   200   III: 12924105-12924304 Caenorhabditis elegans
Exon108110   118   III: 12925679-12925796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.17c.1 12921529 12925796 -1

1 Sequence

Length
678

1 Sequence Ontology Term

Identifier Name Description
transcript