WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.23a.1 Sequence Name  Y37D8A.23a.1
Length (nt)  1706   Chromosome Location  III: 12942651-12949883
Chromosome . Primary Identifier  III Chromosome Location . Start  12942651
Chromosome Location . End  12949883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.23a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006762 unc-25 Y37D8A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.23a Y37D8A.23a 1527   III: 12942661-12942718

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.23a.1 12942651 12949883 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108150   68   III: 12942651-12942718 Caenorhabditis elegans
Exon108153   62   III: 12943720-12943781 Caenorhabditis elegans
Exon108155   135   III: 12943835-12943969 Caenorhabditis elegans
Exon108157   128   III: 12944961-12945088 Caenorhabditis elegans
Exon108160   229   III: 12945999-12946227 Caenorhabditis elegans
Exon108163   651   III: 12947860-12948510 Caenorhabditis elegans
Exon108166   195   III: 12949286-12949480 Caenorhabditis elegans
Exon108171   238   III: 12949646-12949883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.23a.1 12942651 12949883 1

1 Sequence

Length
1706

1 Sequence Ontology Term

Identifier Name Description
transcript