WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4A.2b Sequence Name  Y39E4A.2b
Length (nt)  1233   Chromosome Location  III: 12953205-12953353
Chromosome . Primary Identifier  III Chromosome Location . Start  12953205
Chromosome Location . End  12953353
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4A.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16617 TTM-1, isoform b 44.1 410 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00108001
WBRNAi00056232
WBRNAi00020402
WBRNAi00076781
WBRNAi00006440
WBRNAi00036940
WBRNAi00070127
WBRNAi00095110
WBRNAi00108006
WBRNAi00114328

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4A.2b 12953205 12953353 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012712 ttm-1 Y39E4A.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4A.2b 12953205 12953353 -1
CDS:Y39E4A.2b 12954541 12955333 -1
CDS:Y39E4A.2b 12956722 12957012 -1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4A.2b.1 Y39E4A.2b.1 1628   III: 12952969-12957171