WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1010.8.1 Sequence Name  ZK1010.8.1
Length (nt)  1694   Chromosome Location  III: 12995727-13000511
Chromosome . Primary Identifier  III Chromosome Location . Start  12995727
Chromosome Location . End  13000511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1010.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014181 ZK1010.8 ZK1010.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1010.8 ZK1010.8 1167   III: 12996214-12996460

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1010.8.1 12995727 13000511 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108240   734   III: 12995727-12996460 Caenorhabditis elegans
Exon108242   443   III: 12998235-12998677 Caenorhabditis elegans
Exon108244   63   III: 12998724-12998786 Caenorhabditis elegans
Exon108246   90   III: 12999120-12999209 Caenorhabditis elegans
Exon108248   86   III: 12999254-12999339 Caenorhabditis elegans
Exon108250   77   III: 13000092-13000168 Caenorhabditis elegans
Exon108252   101   III: 13000260-13000360 Caenorhabditis elegans
Exon108254   100   III: 13000412-13000511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1010.8.1 12995727 13000511 -1

1 Sequence

Length
1694

1 Sequence Ontology Term

Identifier Name Description
transcript