WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1010.9.1 Sequence Name  ZK1010.9.1
Length (nt)  2234   Chromosome Location  III: 13005461-13011155
Chromosome . Primary Identifier  III Chromosome Location . Start  13005461
Chromosome Location . End  13011155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1010.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004906 snf-7 ZK1010.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1010.9 ZK1010.9 2118   III: 13005552-13005764

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1010.9.1 13005461 13011155 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108262   304   III: 13005461-13005764 Caenorhabditis elegans
Exon108264   548   III: 13006675-13007222 Caenorhabditis elegans
Exon108265   397   III: 13008197-13008593 Caenorhabditis elegans
Exon108267   259   III: 13009517-13009775 Caenorhabditis elegans
Exon108268   125   III: 13009843-13009967 Caenorhabditis elegans
Exon108269   309   III: 13010013-13010321 Caenorhabditis elegans
Exon108270   90   III: 13010370-13010459 Caenorhabditis elegans
Exon108271   202   III: 13010954-13011155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1010.9.1 13005461 13011155 1

1 Sequence

Length
2234

1 Sequence Ontology Term

Identifier Name Description
transcript