WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4B.2 Sequence Name  Y39E4B.2
Length (nt)  1338   Chromosome Location  III: 13165935-13166053
Chromosome . Primary Identifier  III Chromosome Location . Start  13165935
Chromosome Location . End  13166053
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21714 SNPC-1.2 50.8 445 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056244
WBRNAi00113562
WBRNAi00036945

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.2 13165935 13166053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012715 snpc-1.2 Y39E4B.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.2 13165935 13166053 -1
CDS:Y39E4B.2 13166095 13166242 -1
CDS:Y39E4B.2 13167400 13167602 -1
CDS:Y39E4B.2 13168013 13168406 -1
CDS:Y39E4B.2 13168868 13169155 -1
CDS:Y39E4B.2 13169279 13169363 -1
CDS:Y39E4B.2 13169411 13169511 -1

1 Sequence

Length
1338

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4B.2.1 Y39E4B.2.1 1644   III: 13165659-13169541