WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4B.5 Sequence Name  Y39E4B.5
Length (nt)  1518   Chromosome Location  III: 13169918-13170033
Chromosome . Primary Identifier  III Chromosome Location . Start  13169918
Chromosome Location . End  13170033
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21717 Y39E4B.5 56.6 505 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056247
WBRNAi00006870
WBRNAi00036948

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.5 13169918 13170033 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012716 Y39E4B.5 Y39E4B.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.5 13169918 13170033 1
CDS:Y39E4B.5 13170080 13170146 1
CDS:Y39E4B.5 13170831 13171282 1
CDS:Y39E4B.5 13171338 13171595 1
CDS:Y39E4B.5 13171650 13172034 1
CDS:Y39E4B.5 13172688 13172927 1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4B.5.1 Y39E4B.5.1 1699   III: 13169916-13173106