WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F4A.1b.1 Sequence Name  Y43F4A.1b.1
Length (nt)  457   Chromosome Location  III: 13223072-13224484
Chromosome . Primary Identifier  III Chromosome Location . Start  13223072
Chromosome Location . End  13224484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F4A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012796 Y43F4A.1 Y43F4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F4A.1b Y43F4A.1b 204   III: 13223154-13223240

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F4A.1b.1 13223072 13224484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108560   169   III: 13223072-13223240 Caenorhabditis elegans
Exon108562   110   III: 13224094-13224203 Caenorhabditis elegans
Exon108564   116   III: 13224250-13224365 Caenorhabditis elegans
Exon108565   62   III: 13224423-13224484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F4A.1b.1 13223072 13224484 1

1 Sequence

Length
457

1 Sequence Ontology Term

Identifier Name Description
transcript