WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.9.1 Sequence Name  F56A8.9.1
Length (nt)  881   Chromosome Location  III: 13254675-13256464
Chromosome . Primary Identifier  III Chromosome Location . Start  13254675
Chromosome Location . End  13256464 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00185001 F56A8.9 F56A8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.9 F56A8.9 702   III: 13254688-13254847

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.9.1 13254675 13256464 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108670   173   III: 13254675-13254847 Caenorhabditis elegans
Exon108671   98   III: 13254903-13255000 Caenorhabditis elegans
Exon108672   120   III: 13255048-13255167 Caenorhabditis elegans
Exon108673   206   III: 13255655-13255860 Caenorhabditis elegans
Exon108674   284   III: 13256181-13256464 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.9.1 13254675 13256464 1

1 Sequence

Length
881

1 Sequence Ontology Term

Identifier Name Description
transcript