WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.3a.1 Sequence Name  F56A8.3a.1
Length (nt)  1726   Chromosome Location  III: 13256880-13262903
Chromosome . Primary Identifier  III Chromosome Location . Start  13256880
Chromosome Location . End  13262903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010139 F56A8.3 F56A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.3a F56A8.3a 1335   III: 13256904-13257097

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.3a.1 13256880 13262903 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108677   218   III: 13256880-13257097 Caenorhabditis elegans
Exon108678   97   III: 13257155-13257251 Caenorhabditis elegans
Exon108682   286   III: 13257302-13257587 Caenorhabditis elegans
Exon108688   150   III: 13260739-13260888 Caenorhabditis elegans
Exon108693   220   III: 13261644-13261863 Caenorhabditis elegans
Exon108698   166   III: 13261910-13262075 Caenorhabditis elegans
Exon108703   127   III: 13262130-13262256 Caenorhabditis elegans
Exon108711   462   III: 13262442-13262903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.3a.1 13256880 13262903 1

1 Sequence

Length
1726

1 Sequence Ontology Term

Identifier Name Description
transcript