WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.6.1 Sequence Name  F56A8.6.1
Length (nt)  1101   Chromosome Location  III: 13266932-13268883
Chromosome . Primary Identifier  III Chromosome Location . Start  13266932
Chromosome Location . End  13268883 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000774 cpf-2 F56A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.6 F56A8.6 1011   III: 13267014-13267637

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.6.1 13266932 13268883 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108674   706   III: 13266932-13267637 Caenorhabditis elegans
Exon108675   145   III: 13268341-13268485 Caenorhabditis elegans
Exon108676   122   III: 13268532-13268653 Caenorhabditis elegans
Exon108677   56   III: 13268705-13268760 Caenorhabditis elegans
Exon108678   72   III: 13268812-13268883 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.6.1 13266932 13268883 -1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
transcript