WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.7a.2 Sequence Name  F56A8.7a.2
Length (nt)  2567   Chromosome Location  III: 13277258-13283887
Chromosome . Primary Identifier  III Chromosome Location . Start  13277258
Chromosome Location . End  13283887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006798 unc-64 F56A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.7a F56A8.7a 876   III: 13277369-13277382

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.7a.2 13277258 13283887 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108729   125   III: 13277258-13277382 Caenorhabditis elegans
Exon108733   100   III: 13277428-13277527 Caenorhabditis elegans
Exon108736   100   III: 13278567-13278666 Caenorhabditis elegans
Exon108739   255   III: 13279235-13279489 Caenorhabditis elegans
Exon108742   95   III: 13279873-13279967 Caenorhabditis elegans
Exon108745   117   III: 13280217-13280333 Caenorhabditis elegans
Exon108748   111   III: 13280547-13280657 Caenorhabditis elegans
Exon108751   1664   III: 13282224-13283887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.7a.2 13277258 13283887 1

1 Sequence

Length
2567

1 Sequence Ontology Term

Identifier Name Description
transcript