WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43F4B.7.1 Sequence Name  Y43F4B.7.1
Length (nt)  1613   Chromosome Location  III: 13307502-13313389
Chromosome . Primary Identifier  III Chromosome Location . Start  13307502
Chromosome Location . End  13313389 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F4B.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012804 slc-36.1 Y43F4B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F4B.7 Y43F4B.7 1368   III: 13307508-13307666

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43F4B.7.1 13307502 13313389 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108756   165   III: 13307502-13307666 Caenorhabditis elegans
Exon108757   81   III: 13307731-13307811 Caenorhabditis elegans
Exon108758   89   III: 13307869-13307957 Caenorhabditis elegans
Exon108759   93   III: 13308709-13308801 Caenorhabditis elegans
Exon108760   85   III: 13308850-13308934 Caenorhabditis elegans
Exon108761   178   III: 13308986-13309163 Caenorhabditis elegans
Exon108762   98   III: 13309495-13309592 Caenorhabditis elegans
Exon108763   116   III: 13309728-13309843 Caenorhabditis elegans
Exon108764   60   III: 13310656-13310715 Caenorhabditis elegans
Exon108765   106   III: 13312098-13312203 Caenorhabditis elegans
Exon108766   64   III: 13312256-13312319 Caenorhabditis elegans
Exon108767   107   III: 13312846-13312952 Caenorhabditis elegans
Exon108768   371   III: 13313019-13313389 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43F4B.7.1 13307502 13313389 1

1 Sequence

Length
1613

1 Sequence Ontology Term

Identifier Name Description
transcript