WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43F4B.9a Sequence Name  Y43F4B.9a
Length (nt)  930   Chromosome Location  III: 13315134-13315413
Chromosome . Primary Identifier  III Chromosome Location . Start  13315134
Chromosome Location . End  13315413
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F4B.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40666 DPH-7, isoform a 33.8 309 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056496
WBRNAi00056497
WBRNAi00006253

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43F4B.9a 13315134 13315413 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012806 dph-7 Y43F4B.9 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43F4B.9a 13315134 13315413 1
CDS:Y43F4B.9a 13315459 13315553 1
CDS:Y43F4B.9a 13317384 13317544 1
CDS:Y43F4B.9a 13317712 13317886 1
CDS:Y43F4B.9a 13318292 13318510 1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43F4B.9a.2 Y43F4B.9a.2 1034   III: 13315123-13318603
Transcript:Y43F4B.9a.1 Y43F4B.9a.1 1026   III: 13315125-13318597