WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03F6.5.1 Sequence Name  T03F6.5.1
Length (nt)  1783   Chromosome Location  III: 13371164-13376710
Chromosome . Primary Identifier  III Chromosome Location . Start  13371164
Chromosome Location . End  13376710 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003047 lis-1 T03F6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03F6.5 T03F6.5 1215   III: 13371661-13371734

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.5.1 13371164 13376710 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108874   571   III: 13371164-13371734 Caenorhabditis elegans
Exon108875   106   III: 13372425-13372530 Caenorhabditis elegans
Exon108876   149   III: 13372739-13372887 Caenorhabditis elegans
Exon108877   229   III: 13373301-13373529 Caenorhabditis elegans
Exon108878   167   III: 13374040-13374206 Caenorhabditis elegans
Exon108879   97   III: 13374667-13374763 Caenorhabditis elegans
Exon108880   142   III: 13375259-13375400 Caenorhabditis elegans
Exon108881   140   III: 13376161-13376300 Caenorhabditis elegans
Exon108882   79   III: 13376348-13376426 Caenorhabditis elegans
Exon108883   103   III: 13376608-13376710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.5.1 13371164 13376710 -1

1 Sequence

Length
1783

1 Sequence Ontology Term

Identifier Name Description
transcript