WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03F6.2.1 Sequence Name  T03F6.2.1
Length (nt)  1537   Chromosome Location  III: 13390850-13393339
Chromosome . Primary Identifier  III Chromosome Location . Start  13390850
Chromosome Location . End  13393339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001035 dnj-17 T03F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03F6.2 T03F6.2 1458   III: 13390925-13391166

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.2.1 13390850 13393339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108903   317   III: 13390850-13391166 Caenorhabditis elegans
Exon108904   308   III: 13391223-13391530 Caenorhabditis elegans
Exon108905   171   III: 13392283-13392453 Caenorhabditis elegans
Exon108906   131   III: 13392501-13392631 Caenorhabditis elegans
Exon108907   294   III: 13392686-13392979 Caenorhabditis elegans
Exon108908   316   III: 13393024-13393339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.2.1 13390850 13393339 -1

1 Sequence

Length
1537

1 Sequence Ontology Term

Identifier Name Description
transcript