WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03F6.4.1 Sequence Name  T03F6.4.1
Length (nt)  1300   Chromosome Location  III: 13386150-13388359
Chromosome . Primary Identifier  III Chromosome Location . Start  13386150
Chromosome Location . End  13388359 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011400 T03F6.4 T03F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03F6.4 T03F6.4 1167   III: 13386199-13386249

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.4.1 13386150 13388359 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108938   100   III: 13386150-13386249 Caenorhabditis elegans
Exon108939   101   III: 13386292-13386392 Caenorhabditis elegans
Exon108940   119   III: 13386704-13386822 Caenorhabditis elegans
Exon108941   155   III: 13386869-13387023 Caenorhabditis elegans
Exon108942   140   III: 13387071-13387210 Caenorhabditis elegans
Exon108943   236   III: 13387255-13387490 Caenorhabditis elegans
Exon108944   119   III: 13387561-13387679 Caenorhabditis elegans
Exon108945   101   III: 13387721-13387821 Caenorhabditis elegans
Exon108946   97   III: 13388074-13388170 Caenorhabditis elegans
Exon108947   132   III: 13388228-13388359 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03F6.4.1 13386150 13388359 1

1 Sequence

Length
1300

1 Sequence Ontology Term

Identifier Name Description
transcript