WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45G2.2b.2 Sequence Name  F45G2.2b.2
Length (nt)  3351   Chromosome Location  III: 13411786-13423483
Chromosome . Primary Identifier  III Chromosome Location . Start  13411786
Chromosome Location . End  13423483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45G2.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009730 myo-6 F45G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45G2.2b F45G2.2b 1173   III: 13421016-13421122

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.2 13411786 13423483 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108960   121   III: 13411786-13411906 Caenorhabditis elegans
Exon108963   74   III: 13411957-13412030 Caenorhabditis elegans
Exon108965   86   III: 13412075-13412160 Caenorhabditis elegans
Exon108967   93   III: 13412258-13412350 Caenorhabditis elegans
Exon108969   104   III: 13412397-13412500 Caenorhabditis elegans
Exon108971   139   III: 13412617-13412755 Caenorhabditis elegans
Exon108973   119   III: 13412803-13412921 Caenorhabditis elegans
Exon108975   153   III: 13412970-13413122 Caenorhabditis elegans
Exon108977   171   III: 13413176-13413346 Caenorhabditis elegans
Exon108980   458   III: 13413545-13414002 Caenorhabditis elegans
Exon108982   199   III: 13414182-13414380 Caenorhabditis elegans
Exon108984   78   III: 13414423-13414500 Caenorhabditis elegans
Exon108987   108   III: 13420185-13420292 Caenorhabditis elegans
Exon108990   80   III: 13420650-13420729 Caenorhabditis elegans
Exon108995   159   III: 13420964-13421122 Caenorhabditis elegans
Exon108999   325   III: 13421214-13421538 Caenorhabditis elegans
Exon109003   154   III: 13422021-13422174 Caenorhabditis elegans
Exon109007   94   III: 13422225-13422318 Caenorhabditis elegans
Exon109011   382   III: 13422378-13422759 Caenorhabditis elegans
Exon109014   254   III: 13423230-13423483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.2 13411786 13423483 1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript