WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76A2A.2b.1 Sequence Name  Y76A2A.2b.1
Length (nt)  3351   Chromosome Location  III: 13439921-13452599
Chromosome . Primary Identifier  III Chromosome Location . Start  13439921
Chromosome Location . End  13452599 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76A2A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000834 cua-1 Y76A2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76A2A.2b Y76A2A.2b 3351   III: 13439921-13440294

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2A.2b.1 13439921 13452599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109064   374   III: 13439921-13440294 Caenorhabditis elegans
Exon109066   465   III: 13440907-13441371 Caenorhabditis elegans
Exon109068   150   III: 13442113-13442262 Caenorhabditis elegans
Exon109070   208   III: 13442310-13442517 Caenorhabditis elegans
Exon109072   183   III: 13442918-13443100 Caenorhabditis elegans
Exon109074   186   III: 13443578-13443763 Caenorhabditis elegans
Exon109076   251   III: 13444116-13444366 Caenorhabditis elegans
Exon109078   484   III: 13445043-13445526 Caenorhabditis elegans
Exon109080   175   III: 13446358-13446532 Caenorhabditis elegans
Exon109082   239   III: 13449674-13449912 Caenorhabditis elegans
Exon109084   273   III: 13450474-13450746 Caenorhabditis elegans
Exon109086   125   III: 13451964-13452088 Caenorhabditis elegans
Exon109088   96   III: 13452139-13452234 Caenorhabditis elegans
Exon109089   142   III: 13452458-13452599 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2A.2b.1 13439921 13452599 -1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript