WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76A2A.1.1 Sequence Name  Y76A2A.1.1
Length (nt)  910   Chromosome Location  III: 13459546-13460645
Chromosome . Primary Identifier  III Chromosome Location . Start  13459546
Chromosome Location . End  13460645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76A2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006509 tag-164 Y76A2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76A2A.1 Y76A2A.1 837   III: 13459582-13459586

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2A.1.1 13459546 13460645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109096   41   III: 13459546-13459586 Caenorhabditis elegans
Exon109097   657   III: 13459635-13460291 Caenorhabditis elegans
Exon109098   212   III: 13460434-13460645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2A.1.1 13459546 13460645 1

1 Sequence

Length
910

1 Sequence Ontology Term

Identifier Name Description
transcript