WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27E9.4a.1 Sequence Name  T27E9.4a.1
Length (nt)  1906   Chromosome Location  III: 13464829-13471345
Chromosome . Primary Identifier  III Chromosome Location . Start  13464829
Chromosome Location . End  13471345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002185 kel-3 T27E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E9.4a T27E9.4a 1770   III: 13466579-13466776

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.4a.1 13464829 13471345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109109   97   III: 13464829-13464925 Caenorhabditis elegans
Exon109115   199   III: 13466578-13466776 Caenorhabditis elegans
Exon109119   88   III: 13466830-13466917 Caenorhabditis elegans
Exon109125   69   III: 13466967-13467035 Caenorhabditis elegans
Exon109127   179   III: 13467086-13467264 Caenorhabditis elegans
Exon109131   170   III: 13467834-13468003 Caenorhabditis elegans
Exon109135   103   III: 13468264-13468366 Caenorhabditis elegans
Exon109139   327   III: 13469135-13469461 Caenorhabditis elegans
Exon109143   205   III: 13470058-13470262 Caenorhabditis elegans
Exon109147   292   III: 13470313-13470604 Caenorhabditis elegans
Exon109151   177   III: 13471169-13471345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.4a.1 13464829 13471345 1

1 Sequence

Length
1906

1 Sequence Ontology Term

Identifier Name Description
transcript