WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27E9.5.1 Sequence Name  T27E9.5.1
Length (nt)  1650   Chromosome Location  III: 13471804-13475388
Chromosome . Primary Identifier  III Chromosome Location . Start  13471804
Chromosome Location . End  13475388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012095 pssy-2 T27E9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E9.5 T27E9.5 1509   III: 13471873-13471931

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.5.1 13471804 13475388 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109155   128   III: 13471804-13471931 Caenorhabditis elegans
Exon109156   87   III: 13471986-13472072 Caenorhabditis elegans
Exon109157   171   III: 13472146-13472316 Caenorhabditis elegans
Exon109158   208   III: 13472366-13472573 Caenorhabditis elegans
Exon109159   213   III: 13473118-13473330 Caenorhabditis elegans
Exon109160   152   III: 13473664-13473815 Caenorhabditis elegans
Exon109161   151   III: 13474153-13474303 Caenorhabditis elegans
Exon109162   113   III: 13474489-13474601 Caenorhabditis elegans
Exon109163   166   III: 13474848-13475013 Caenorhabditis elegans
Exon109164   261   III: 13475128-13475388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.5.1 13471804 13475388 1

1 Sequence

Length
1650

1 Sequence Ontology Term

Identifier Name Description
transcript