WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27E9.9b.1 Sequence Name  T27E9.9b.1
Length (nt)  1315   Chromosome Location  III: 13480668-13484124
Chromosome . Primary Identifier  III Chromosome Location . Start  13480668
Chromosome Location . End  13484124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27E9.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012099 acc-4 T27E9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E9.9b T27E9.9b 1230   III: 13480753-13480780

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.9b.1 13480668 13484124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109172   113   III: 13480668-13480780 Caenorhabditis elegans
Exon109177   68   III: 13481567-13481634 Caenorhabditis elegans
Exon109180   61   III: 13481930-13481990 Caenorhabditis elegans
Exon109183   159   III: 13482107-13482265 Caenorhabditis elegans
Exon109186   191   III: 13482310-13482500 Caenorhabditis elegans
Exon109189   175   III: 13482638-13482812 Caenorhabditis elegans
Exon109192   63   III: 13482857-13482919 Caenorhabditis elegans
Exon109195   126   III: 13482969-13483094 Caenorhabditis elegans
Exon109198   190   III: 13483464-13483653 Caenorhabditis elegans
Exon109201   83   III: 13483702-13483784 Caenorhabditis elegans
Exon109204   86   III: 13484039-13484124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27E9.9b.1 13480668 13484124 -1

1 Sequence

Length
1315

1 Sequence Ontology Term

Identifier Name Description
transcript