WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28A8.8a.1 Sequence Name  T28A8.8a.1
Length (nt)  584   Chromosome Location  III: 13502813-13503578
Chromosome . Primary Identifier  III Chromosome Location . Start  13502813
Chromosome Location . End  13503578 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28A8.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194852 T28A8.8 T28A8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28A8.8a T28A8.8a 225   III: 13503058-13503146

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.8a.1 13502813 13503578 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109259   176   III: 13502813-13502988 Caenorhabditis elegans
Exon109261   114   III: 13503033-13503146 Caenorhabditis elegans
Exon109263   73   III: 13503195-13503267 Caenorhabditis elegans
Exon109266   221   III: 13503358-13503578 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.8a.1 13502813 13503578 1

1 Sequence

Length
584

1 Sequence Ontology Term

Identifier Name Description
transcript