WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28A8.4.1 Sequence Name  T28A8.4.1
Length (nt)  1519   Chromosome Location  III: 13503679-13505536
Chromosome . Primary Identifier  III Chromosome Location . Start  13503679
Chromosome Location . End  13505536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28A8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012110 T28A8.4 T28A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28A8.4 T28A8.4 1410   III: 13503690-13503832

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.4.1 13503679 13505536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109267   154   III: 13503679-13503832 Caenorhabditis elegans
Exon109268   114   III: 13503875-13503988 Caenorhabditis elegans
Exon109269   273   III: 13504042-13504314 Caenorhabditis elegans
Exon109270   114   III: 13504360-13504473 Caenorhabditis elegans
Exon109271   147   III: 13504521-13504667 Caenorhabditis elegans
Exon109272   337   III: 13504725-13505061 Caenorhabditis elegans
Exon109273   216   III: 13505109-13505324 Caenorhabditis elegans
Exon109274   164   III: 13505373-13505536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.4.1 13503679 13505536 1

1 Sequence

Length
1519

1 Sequence Ontology Term

Identifier Name Description
transcript