WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y76A2B.1c Sequence Name  Y76A2B.1c
Length (nt)  3411   Chromosome Location  III: 13516053-13516073
Chromosome . Primary Identifier  III Chromosome Location . Start  13516053
Chromosome Location . End  13516073
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76A2B.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47849 POD-1, isoform c 124.5 1136 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00009425
WBRNAi00085845
WBRNAi00027877
WBRNAi00078554
WBRNAi00091269
WBRNAi00058485
WBRNAi00058486
WBRNAi00026959
WBRNAi00113793
WBRNAi00115698

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y76A2B.1c 13516053 13516073 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004075 pod-1 Y76A2B.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y76A2B.1c 13516053 13516073 -1
CDS:Y76A2B.1c 13516528 13516934 -1
CDS:Y76A2B.1c 13517971 13518200 -1
CDS:Y76A2B.1c 13518248 13520160 -1
CDS:Y76A2B.1c 13520392 13520858 -1
CDS:Y76A2B.1c 13521227 13521404 -1
CDS:Y76A2B.1c 13523745 13523876 -1
CDS:Y76A2B.1c 13524031 13524093 -1

1 Sequence

Length
3411

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y76A2B.1c.1 Y76A2B.1c.1 4028   III: 13514945-13524110
Transcript:Y76A2B.1c.2 Y76A2B.1c.2 3957   III: 13514990-13524093