WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05D4.4a Sequence Name  T05D4.4a
Length (nt)  1956   Chromosome Location  III: 13576204-13576458
Chromosome . Primary Identifier  III Chromosome Location . Start  13576204
Chromosome Location . End  13576458
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05D4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34087 OSM-7, isoform a 73.0 651 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00088842
WBRNAi00000259
WBRNAi00052507
WBRNAi00035199
WBRNAi00006304
WBRNAi00026192
WBRNAi00009116
WBRNAi00106881
WBRNAi00064429
WBRNAi00097001

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05D4.4a 13576204 13576458 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003887 osm-7 T05D4.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05D4.4a 13576204 13576458 1
CDS:T05D4.4a 13577007 13577179 1
CDS:T05D4.4a 13577393 13577564 1
CDS:T05D4.4a 13577683 13577822 1
CDS:T05D4.4a 13577978 13578066 1
CDS:T05D4.4a 13578172 13578283 1
CDS:T05D4.4a 13578344 13578394 1
CDS:T05D4.4a 13578445 13578657 1
CDS:T05D4.4a 13578991 13579157 1
CDS:T05D4.4a 13579517 13579624 1
CDS:T05D4.4a 13579670 13579772 1
CDS:T05D4.4a 13580167 13580539 1

1 Sequence

Length
1956

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05D4.4a.1 T05D4.4a.1 2101   III: 13576182-13580662