WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12D8.1.1 Sequence Name  T12D8.1.1
Length (nt)  7793   Chromosome Location  III: 13643916-13656637
Chromosome . Primary Identifier  III Chromosome Location . Start  13643916
Chromosome Location . End  13656637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011729 set-16 T12D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12D8.1 T12D8.1 7428   III: 13643981-13643986

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12D8.1.1 13643916 13656637 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109509   71   III: 13643916-13643986 Caenorhabditis elegans
Exon109510   102   III: 13644039-13644140 Caenorhabditis elegans
Exon109511   77   III: 13644196-13644272 Caenorhabditis elegans
Exon109512   441   III: 13644335-13644775 Caenorhabditis elegans
Exon109513   646   III: 13645793-13646438 Caenorhabditis elegans
Exon109514   114   III: 13646644-13646757 Caenorhabditis elegans
Exon109515   341   III: 13647213-13647553 Caenorhabditis elegans
Exon109516   254   III: 13647857-13648110 Caenorhabditis elegans
Exon109517   645   III: 13648576-13649220 Caenorhabditis elegans
Exon109518   1181   III: 13649506-13650686 Caenorhabditis elegans
Exon109519   1839   III: 13651309-13653147 Caenorhabditis elegans
Exon109520   357   III: 13653833-13654189 Caenorhabditis elegans
Exon109521   1083   III: 13654328-13655410 Caenorhabditis elegans
Exon109522   249   III: 13655912-13656160 Caenorhabditis elegans
Exon109523   393   III: 13656245-13656637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12D8.1.1 13643916 13656637 1

1 Sequence

Length
7793

1 Sequence Ontology Term

Identifier Name Description
transcript