WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK520.4d.1 Sequence Name  ZK520.4d.1
Length (nt)  2818   Chromosome Location  III: 13687753-13692683
Chromosome . Primary Identifier  III Chromosome Location . Start  13687753
Chromosome Location . End  13692683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK520.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000837 cul-2 ZK520.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK520.4d ZK520.4d 2232   III: 13687753-13687874

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK520.4d.1 13687753 13692683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109571   122   III: 13687753-13687874 Caenorhabditis elegans
Exon109575   61   III: 13688617-13688677 Caenorhabditis elegans
Exon109579   140   III: 13688812-13688951 Caenorhabditis elegans
Exon109583   106   III: 13689114-13689219 Caenorhabditis elegans
Exon109584   1167   III: 13689442-13690608 Caenorhabditis elegans
Exon109588   408   III: 13690708-13691115 Caenorhabditis elegans
Exon109589   99   III: 13691610-13691708 Caenorhabditis elegans
Exon109596   715   III: 13691969-13692683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK520.4d.1 13687753 13692683 1

1 Sequence

Length
2818

1 Sequence Ontology Term

Identifier Name Description
transcript