WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06F12.1d.1 Sequence Name  W06F12.1d.1
Length (nt)  2868   Chromosome Location  III: 13701993-13724401
Chromosome . Primary Identifier  III Chromosome Location . Start  13701993
Chromosome Location . End  13724401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06F12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.1d W06F12.1d 1806   III: 13702192-13702246

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.1d.1 13701993 13724401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109650   77   III: 13701993-13702069 Caenorhabditis elegans
Exon109652   102   III: 13702145-13702246 Caenorhabditis elegans
Exon109657   105   III: 13714572-13714676 Caenorhabditis elegans
Exon109661   174   III: 13715498-13715671 Caenorhabditis elegans
Exon109665   102   III: 13715750-13715851 Caenorhabditis elegans
Exon109671   113   III: 13718354-13718466 Caenorhabditis elegans
Exon109679   116   III: 13719826-13719941 Caenorhabditis elegans
Exon109686   186   III: 13720097-13720282 Caenorhabditis elegans
Exon109694   107   III: 13721690-13721796 Caenorhabditis elegans
Exon109701   635   III: 13722263-13722897 Caenorhabditis elegans
Exon109708   1151   III: 13723251-13724401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.1d.1 13701993 13724401 1

1 Sequence

Length
2868

1 Sequence Ontology Term

Identifier Name Description
transcript