WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06F12.2d.1 Sequence Name  W06F12.2d.1
Length (nt)  2001   Chromosome Location  III: 13726633-13731689
Chromosome . Primary Identifier  III Chromosome Location . Start  13726633
Chromosome Location . End  13731689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06F12.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012306 W06F12.2 W06F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.2d W06F12.2d 1701   III: 13726825-13726848

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2d.1 13726633 13731689 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109663   216   III: 13726633-13726848 Caenorhabditis elegans
Exon109669   670   III: 13726923-13727592 Caenorhabditis elegans
Exon109676   80   III: 13728743-13728822 Caenorhabditis elegans
Exon109680   80   III: 13728868-13728947 Caenorhabditis elegans
Exon109684   207   III: 13729024-13729230 Caenorhabditis elegans
Exon109688   39   III: 13729280-13729318 Caenorhabditis elegans
Exon109692   142   III: 13729365-13729506 Caenorhabditis elegans
Exon109696   236   III: 13729588-13729823 Caenorhabditis elegans
Exon109701   154   III: 13730373-13730526 Caenorhabditis elegans
Exon109706   177   III: 13731513-13731689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2d.1 13726633 13731689 -1

1 Sequence

Length
2001

1 Sequence Ontology Term

Identifier Name Description
transcript