WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06F12.2a.1 Sequence Name  W06F12.2a.1
Length (nt)  1974   Chromosome Location  III: 13726640-13731681
Chromosome . Primary Identifier  III Chromosome Location . Start  13726640
Chromosome Location . End  13731681 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06F12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012306 W06F12.2 W06F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.2a W06F12.2a 1689   III: 13726825-13726848

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2a.1 13726640 13731681 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109713   209   III: 13726640-13726848 Caenorhabditis elegans
Exon109716   670   III: 13726923-13727592 Caenorhabditis elegans
Exon109723   80   III: 13728743-13728822 Caenorhabditis elegans
Exon109727   68   III: 13728868-13728935 Caenorhabditis elegans
Exon109731   207   III: 13729024-13729230 Caenorhabditis elegans
Exon109735   39   III: 13729280-13729318 Caenorhabditis elegans
Exon109739   142   III: 13729365-13729506 Caenorhabditis elegans
Exon109743   236   III: 13729588-13729823 Caenorhabditis elegans
Exon109749   154   III: 13730373-13730526 Caenorhabditis elegans
Exon109754   169   III: 13731513-13731681 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06F12.2a.1 13726640 13731681 -1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
transcript