WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E3.1.1 Sequence Name  K08E3.1.1
Length (nt)  2263   Chromosome Location  III: 13744222-13747287
Chromosome . Primary Identifier  III Chromosome Location . Start  13744222
Chromosome Location . End  13747287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010661 tyr-2 K08E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E3.1 K08E3.1 2046   III: 13744227-13744466

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.1.1 13744222 13747287 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109717   245   III: 13744222-13744466 Caenorhabditis elegans
Exon109718   180   III: 13744561-13744740 Caenorhabditis elegans
Exon109719   101   III: 13744936-13745036 Caenorhabditis elegans
Exon109720   443   III: 13745091-13745533 Caenorhabditis elegans
Exon109721   104   III: 13745715-13745818 Caenorhabditis elegans
Exon109722   396   III: 13746005-13746400 Caenorhabditis elegans
Exon109723   438   III: 13746447-13746884 Caenorhabditis elegans
Exon109724   356   III: 13746932-13747287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.1.1 13744222 13747287 1

1 Sequence

Length
2263

1 Sequence Ontology Term

Identifier Name Description
transcript