WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E3.7b.1 Sequence Name  K08E3.7b.1
Length (nt)  1183   Chromosome Location  III: 13771513-13773345
Chromosome . Primary Identifier  III Chromosome Location . Start  13771513
Chromosome Location . End  13773345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E3.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003967 pdr-1 K08E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E3.7b K08E3.7b 732   III: 13771531-13771599

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.7b.1 13771513 13773345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109820   87   III: 13771513-13771599 Caenorhabditis elegans
Exon109824   146   III: 13771645-13771790 Caenorhabditis elegans
Exon109828   433   III: 13771881-13772313 Caenorhabditis elegans
Exon109834   205   III: 13772730-13772934 Caenorhabditis elegans
Exon109838   75   III: 13772988-13773062 Caenorhabditis elegans
Exon109843   237   III: 13773109-13773345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.7b.1 13771513 13773345 1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript