WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E3.7b.2 Sequence Name  K08E3.7b.2
Length (nt)  1176   Chromosome Location  III: 13771513-13773292
Chromosome . Primary Identifier  III Chromosome Location . Start  13771513
Chromosome Location . End  13773292 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E3.7b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003967 pdr-1 K08E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E3.7b K08E3.7b 732   III: 13771531-13771599

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.7b.2 13771513 13773292 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109821   87   III: 13771513-13771599 Caenorhabditis elegans
Exon109825   146   III: 13771645-13771790 Caenorhabditis elegans
Exon109829   433   III: 13771881-13772313 Caenorhabditis elegans
Exon109835   205   III: 13772730-13772934 Caenorhabditis elegans
Exon109840   305   III: 13772988-13773292 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.7b.2 13771513 13773292 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript